miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|261506500|gb|GT186246.1|GT186246 TTCCTTCGTAGGTAATGTCAACTACAATTGTTTACACCCTAAGCCAGTACATTCCAGCGCGGATCTAGTGTAGTCTGGCA
GTGCTTCAGTAGGCCCAACGGTGGCCACAGCGGGGCAGCGGTCGTACAGGTACTTGTAGCACACATCACGCACATTCTGC
ACAGAGACAGCTTCAATACGGGCATCAAGCTCATGGATGGGGATGCGACGGTTGTAGCACAACATTTGACGACCAATGTC
TTCACACACAGGGGTGGTGCCGTCCAGCTGAAGAAGCATGTTGGTCTTGAGGAGGTTCCTGGCACGCTCAACCTCACCCT
CAGTGACTGATGTGCAGAGCTTCATCCACTCCTTCTGGACATTGTACAGCATATCTTCCAACTGCATGGGTTCAGCTACA
AAGTAAATGCCCCAAAGTCCAGTGTCCTTGTAGCATGTGTTGAAGGACTGGAAGCTGTGGCAAAGATTGCCAGCAGACGC
AGCACGGGCCAGGAAGGAGGCGTTGTTGACGCCACCACCCTGGGAGCGGTCCCAAGCTCCAATGAGAGTGTTGGCAACCA
TC




Most similar to sp|Q5REK3|MPPB_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5REK3|MPPB_PONAB Mitochondrial-processing peptidase subunit
           beta OS=Pongo abelii GN=PMPCB PE=2 SV=1
          Length = 489

 Score =  254 bits (648), Expect = 3e-67
 Identities = 119/164 (72%), Positives = 138/164 (84%)
 Frame = -2

Query: 561 MVANTLIGAWDRSQGGGVNNASFLARAASAGNLCHSFQSFNTCYKDTGLWGIYFVAEPMQ 382
           MVANTLIG WDRS GGG+N +S LA+    GNLCHSFQSFNT Y DTGLWG+Y V EP  
Sbjct: 314 MVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMVCEPST 373

Query: 381 LEDMLYNVQKEWMKLCTSVTEGEVERARNLLKTNMLLQLDGTTPVCEDIGRQMLCYNRRI 202
           + DML+ VQKEWM+LCTSVTE EV RARNLLKTNMLLQLDG+TP+CEDIGRQMLCYNRRI
Sbjct: 374 VADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRI 433

Query: 201 PIHELDARIEAVSVQNVRDVCYKYLYDRCPAVATVGPTEALPDY 70
           PI EL+ARI+AV+ + +R+VC KY+Y+R PA+A VGP E LPD+
Sbjct: 434 PIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIEQLPDF 477